USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: CLIC5_HUMAN USC-OGP 2-DE database:  CLIC5_HUMAN CLIC5_HUMAN General information about the entry View entry in simple text format Entry name CLIC5_HUMAN Primary accession number Q9NZA1 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Chloride intracellular channel protein 5;. Gene name Name=CLIC5 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0497: pI=5.21; Mw=29057 SPOT OGP-0500: pI=5.30; Mw=28252 Cross-references UniProtKB/Swiss-Prot Q9NZA1; CLIC5_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name CLIC5_HUMAN Primary accession number Q9NZA1 Secondary accession number(s) B3KUF1 Q5T4Z0 Q8NBY3 Q96JT5 Q9BWZ0 Sequence was last modified on  November 25, 2008 (version 3) Annotations were last modified on  March 15, 2017 (version 158) Name and origin of the protein Description RecName: Full=Chloride intracellular channel protein 5; Gene name Name=CLIC5 Encoded on Name=CLIC5 Keywords Alternative splicing; Chloride; Chloride channel; Complete proteome; Cytoplasm; Cytoskeleton; Deafness; Golgi apparatus; Hearing; Ion channel; Ion transport; Membrane; Non-syndromic deafness; Polymorphism; Reference proteome; Transmembrane; Transmembrane helix; Transport; Voltage-gated channel. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF216941; AAF66928.1; -; mRNA EMBL AY032602; AAK52083.1; -; mRNA EMBL AK075163; BAC11444.1; -; mRNA EMBL AK097048; BAG53413.1; -; mRNA EMBL AK075144; BAC11432.1; -; mRNA EMBL AL050336; CAI21030.1; -; Genomic_DNA EMBL AL357057; CAI21030.1; JOINED; Genomic_DNA EMBL AL050336; CAI21031.1; -; Genomic_DNA EMBL AL357057; CAI21031.1; JOINED; Genomic_DNA EMBL AL355522; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL AL591211; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL CH471081; EAX04286.1; -; Genomic_DNA EMBL CH471081; EAX04287.1; -; Genomic_DNA EMBL BC035968; AAH35968.1; -; mRNA CCDS CCDS47438.1; -. [Q9NZA1-1]; . CCDS CCDS4914.1; -. [Q9NZA1-2]; . CCDS CCDS59022.1; -. [Q9NZA1-3]; . RefSeq NP_001107558.1; NM_001114086.1. [Q9NZA1-1]; . RefSeq NP_001242952.1; NM_001256023.1. [Q9NZA1-3]; . RefSeq NP_058625.2; NM_016929.4. [Q9NZA1-2]; . RefSeq XP_016866442.1; XM_017010953.1. [Q9NZA1-1]; . UniGene Hs.485489; -; . UniGene Hs.734348; -; . ProteinModelPortal Q9NZA1; -; . SMR Q9NZA1; -; . BioGrid 119781; 7; . IntAct Q9NZA1; 7; . MINT MINT-4540449; -; . STRING 9606.ENSP00000185206; -; . iPTMnet Q9NZA1; -; . PhosphoSitePlus Q9NZA1; -; . BioMuta CLIC5; -; . DMDM 215274174; -; . OGP Q9NZA1; -; . EPD Q9NZA1; -; . MaxQB Q9NZA1; -; . PaxDb Q9NZA1; -; . PeptideAtlas Q9NZA1; -; . PRIDE Q9NZA1; -; . DNASU 53405; -; . Ensembl ENST00000185206; ENSP00000185206; ENSG00000112782. [Q9NZA1-1]; . Ensembl ENST00000339561; ENSP00000344165; ENSG00000112782. [Q9NZA1-2]; . Ensembl ENST00000544153; ENSP00000439195; ENSG00000112782. [Q9NZA1-3]; . GeneID 53405; -; . KEGG hsa:53405; -; . UCSC uc003oxu.5; human. [Q9NZA1-1]; . CTD 53405; -; . DisGeNET 53405; -; . GeneCards CLIC5; -; . HGNC HGNC:13517; CLIC5; . HPA HPA074371; -; . MalaCards CLIC5; -; . MIM 607293; gene; . MIM 616042; phenotype; . neXtProt NX_Q9NZA1; -; . OpenTargets ENSG00000112782; -; . Orphanet 90636; Autosomal recessive non-syndromic sensorineural deafness type DFNB; . PharmGKB PA26592; -; . eggNOG KOG1422; Eukaryota; . eggNOG ENOG410ZRK6; LUCA; . GeneTree ENSGT00550000074477; -; . HOGENOM HOG000065740; -; . HOVERGEN HBG050995; -; . InParanoid Q9NZA1; -; . KO K05025; -; . OMA GAICKAG; -; . OrthoDB EOG091G0IHT; -; . PhylomeDB Q9NZA1; -; . TreeFam TF315438; -; . ChiTaRS CLIC5; human; . GeneWiki CLIC5; -; . GenomeRNAi 53405; -; . PRO PR:Q9NZA1; -; . Proteomes UP000005640; Chromosome 6; . Bgee ENSG00000112782; -; . CleanEx HS_CLIC5; -; . ExpressionAtlas Q9NZA1; baseline and differential; . Genevisible Q9NZA1; HS; . GO GO:0015629; C:actin cytoskeleton; IDA:UniProtKB; . GO GO:0005938; C:cell cortex; IEA:UniProtKB-SubCell; . GO GO:0034707; C:chloride channel complex; IEA:UniProtKB-KW; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005794; C:Golgi apparatus; IDA:UniProtKB; . GO GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell; . GO GO:0005254; F:chloride channel activity; IEA:UniProtKB-KW; . GO GO:0005244; F:voltage-gated ion channel activity; IEA:UniProtKB-KW; . GO GO:0006821; P:chloride transport; IDA:UniProtKB; . GO GO:0007565; P:female pregnancy; TAS:ProtInc; . GO GO:0007605; P:sensory perception of sound; IMP:UniProtKB; . GO GO:0006810; P:transport; NAS:ProtInc; . Gene3D 1.20.1050.10; -; 1; . Gene3D 3.40.30.10; -; 1; . InterPro IPR002946; CLIC; . InterPro IPR030264; CLIC-5; . InterPro IPR010987; Glutathione-S-Trfase_C-like; . InterPro IPR004045; Glutathione_S-Trfase_N; . InterPro IPR012336; Thioredoxin-like_fold; . PANTHER PTHR11260:SF445; PTHR11260:SF445; 1; . Pfam PF13417; GST_N_3; 1; . PRINTS PR01263; INTCLCHANNEL; . SFLD SFLDG01175; Main.10_; 1; . SUPFAM SSF47616; SSF47616; 1; . SUPFAM SSF52833; SSF52833; 1; . TIGRFAMs TIGR00862; O-ClC; 1; . PROSITE PS50405; GST_CTER; 1; .

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• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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